PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A08G0476
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 168aa    MW: 19565.9 Da    PI: 6.1514
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A08G0476genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.21.1e-1574126557
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                  +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN++L+++l++ ++  +
  Gh_A08G0476  74 RKQRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLIDKLNHVSESHD 126
                  689***************************************99999887655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.880.103.1E-53288IPR008917Transcription factor, Skn-1-like, DNA-binding domain
SMARTSM003381.4E-1470134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.58872135IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-1374124No hitNo description
PfamPF001702.1E-1374126IPR004827Basic-leucine zipper domain
CDDcd147028.38E-1975126No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-1289147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MQPSEISGLQ YIVPSNPSPY SVPAFELSRF SNPLHNLYIP PQLQEIISPH PSCINNNSTS  60
DEADEQQLCV INERKQRRMI SNRESARRSR MRKQRHLDEL WSQVVWLRNE NHQLIDKLNH  120
VSESHDKVVE ENVQLKEEAS QLRRMLSDMQ LTSPYSPLTD LEHALADN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18693RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012477888.11e-117PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC21e-45BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A0D2R0281e-117A0A0D2R028_G
STRINGPOPTR_0004s10990.15e-75(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31122667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-52basic leucine-zipper 42